Serveur d'exploration sur la grippe en Espagne

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

D225G mutation in the hemagglutinin protein found in 3 severe cases of 2009 pandemic influenza A (H1N1) in Spain.

Identifieur interne : 000489 ( Main/Exploration ); précédent : 000488; suivant : 000490

D225G mutation in the hemagglutinin protein found in 3 severe cases of 2009 pandemic influenza A (H1N1) in Spain.

Auteurs : Andrés Ant N [Espagne] ; María Angeles Marcos ; Miguel Julián Martínez ; Susana Ram N ; Anna Martínez ; Neus Carde Osa ; Pere Godoy ; Nuria Torner ; Patricia De Molina ; Ricard Isanta ; María Teresa Jiménez De Anta ; Tomàs Pumarola

Source :

RBID : pubmed:20356695

Descripteurs français

English descriptors

Abstract

From 27 April to 16 December 2009, we analyzed the hemagglutinin gene sequence of 2009 pandemic influenza A (H1N1) virus in 189 respiratory specimens. We only found the D225G mutation in 3 severe cases. However, it was not found in samples from other cases with or without clinical criteria of severity. The biologic significance of this mutation remains still unclear.

DOI: 10.1016/j.diagmicrobio.2010.02.002
PubMed: 20356695


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">D225G mutation in the hemagglutinin protein found in 3 severe cases of 2009 pandemic influenza A (H1N1) in Spain.</title>
<author>
<name sortKey="Ant N, Andres" sort="Ant N, Andres" uniqKey="Ant N A" first="Andrés" last="Ant N">Andrés Ant N</name>
<affiliation wicri:level="2">
<nlm:affiliation>Microbiology Laboratory, Hospital Clínic, 08036 Barcelona, Spain. aanton76@gmail.com</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>Microbiology Laboratory, Hospital Clínic, 08036 Barcelona</wicri:regionArea>
<placeName>
<region nuts="2" type="communauté">Catalogne</region>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Marcos, Maria Angeles" sort="Marcos, Maria Angeles" uniqKey="Marcos M" first="María Angeles" last="Marcos">María Angeles Marcos</name>
</author>
<author>
<name sortKey="Martinez, Miguel Julian" sort="Martinez, Miguel Julian" uniqKey="Martinez M" first="Miguel Julián" last="Martínez">Miguel Julián Martínez</name>
</author>
<author>
<name sortKey="Ram N, Susana" sort="Ram N, Susana" uniqKey="Ram N S" first="Susana" last="Ram N">Susana Ram N</name>
</author>
<author>
<name sortKey="Martinez, Anna" sort="Martinez, Anna" uniqKey="Martinez A" first="Anna" last="Martínez">Anna Martínez</name>
</author>
<author>
<name sortKey="Carde Osa, Neus" sort="Carde Osa, Neus" uniqKey="Carde Osa N" first="Neus" last="Carde Osa">Neus Carde Osa</name>
</author>
<author>
<name sortKey="Godoy, Pere" sort="Godoy, Pere" uniqKey="Godoy P" first="Pere" last="Godoy">Pere Godoy</name>
</author>
<author>
<name sortKey="Torner, Nuria" sort="Torner, Nuria" uniqKey="Torner N" first="Nuria" last="Torner">Nuria Torner</name>
</author>
<author>
<name sortKey="De Molina, Patricia" sort="De Molina, Patricia" uniqKey="De Molina P" first="Patricia" last="De Molina">Patricia De Molina</name>
</author>
<author>
<name sortKey="Isanta, Ricard" sort="Isanta, Ricard" uniqKey="Isanta R" first="Ricard" last="Isanta">Ricard Isanta</name>
</author>
<author>
<name sortKey="Jimenez De Anta, Maria Teresa" sort="Jimenez De Anta, Maria Teresa" uniqKey="Jimenez De Anta M" first="María Teresa" last="Jiménez De Anta">María Teresa Jiménez De Anta</name>
</author>
<author>
<name sortKey="Pumarola, Tomas" sort="Pumarola, Tomas" uniqKey="Pumarola T" first="Tomàs" last="Pumarola">Tomàs Pumarola</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2010">2010</date>
<idno type="RBID">pubmed:20356695</idno>
<idno type="pmid">20356695</idno>
<idno type="doi">10.1016/j.diagmicrobio.2010.02.002</idno>
<idno type="wicri:Area/Main/Corpus">00472</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">00472</idno>
<idno type="wicri:Area/Main/Curation">000472</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000472</idno>
<idno type="wicri:Area/Main/Exploration">000472</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">D225G mutation in the hemagglutinin protein found in 3 severe cases of 2009 pandemic influenza A (H1N1) in Spain.</title>
<author>
<name sortKey="Ant N, Andres" sort="Ant N, Andres" uniqKey="Ant N A" first="Andrés" last="Ant N">Andrés Ant N</name>
<affiliation wicri:level="2">
<nlm:affiliation>Microbiology Laboratory, Hospital Clínic, 08036 Barcelona, Spain. aanton76@gmail.com</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>Microbiology Laboratory, Hospital Clínic, 08036 Barcelona</wicri:regionArea>
<placeName>
<region nuts="2" type="communauté">Catalogne</region>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Marcos, Maria Angeles" sort="Marcos, Maria Angeles" uniqKey="Marcos M" first="María Angeles" last="Marcos">María Angeles Marcos</name>
</author>
<author>
<name sortKey="Martinez, Miguel Julian" sort="Martinez, Miguel Julian" uniqKey="Martinez M" first="Miguel Julián" last="Martínez">Miguel Julián Martínez</name>
</author>
<author>
<name sortKey="Ram N, Susana" sort="Ram N, Susana" uniqKey="Ram N S" first="Susana" last="Ram N">Susana Ram N</name>
</author>
<author>
<name sortKey="Martinez, Anna" sort="Martinez, Anna" uniqKey="Martinez A" first="Anna" last="Martínez">Anna Martínez</name>
</author>
<author>
<name sortKey="Carde Osa, Neus" sort="Carde Osa, Neus" uniqKey="Carde Osa N" first="Neus" last="Carde Osa">Neus Carde Osa</name>
</author>
<author>
<name sortKey="Godoy, Pere" sort="Godoy, Pere" uniqKey="Godoy P" first="Pere" last="Godoy">Pere Godoy</name>
</author>
<author>
<name sortKey="Torner, Nuria" sort="Torner, Nuria" uniqKey="Torner N" first="Nuria" last="Torner">Nuria Torner</name>
</author>
<author>
<name sortKey="De Molina, Patricia" sort="De Molina, Patricia" uniqKey="De Molina P" first="Patricia" last="De Molina">Patricia De Molina</name>
</author>
<author>
<name sortKey="Isanta, Ricard" sort="Isanta, Ricard" uniqKey="Isanta R" first="Ricard" last="Isanta">Ricard Isanta</name>
</author>
<author>
<name sortKey="Jimenez De Anta, Maria Teresa" sort="Jimenez De Anta, Maria Teresa" uniqKey="Jimenez De Anta M" first="María Teresa" last="Jiménez De Anta">María Teresa Jiménez De Anta</name>
</author>
<author>
<name sortKey="Pumarola, Tomas" sort="Pumarola, Tomas" uniqKey="Pumarola T" first="Tomàs" last="Pumarola">Tomàs Pumarola</name>
</author>
</analytic>
<series>
<title level="j">Diagnostic microbiology and infectious disease</title>
<idno type="eISSN">1879-0070</idno>
<imprint>
<date when="2010" type="published">2010</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Hemagglutinins, Viral (genetics)</term>
<term>Hemagglutinins, Viral (isolation & purification)</term>
<term>Humans (MeSH)</term>
<term>Influenza A Virus, H1N1 Subtype (genetics)</term>
<term>Influenza A Virus, H1N1 Subtype (isolation & purification)</term>
<term>Influenza, Human (virology)</term>
<term>Mutation, Missense (MeSH)</term>
<term>Point Mutation (MeSH)</term>
<term>Sequence Analysis, DNA (MeSH)</term>
<term>Spain (MeSH)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Analyse de séquence d'ADN (MeSH)</term>
<term>Espagne (MeSH)</term>
<term>Grippe humaine (virologie)</term>
<term>Humains (MeSH)</term>
<term>Hémagglutinines virales (génétique)</term>
<term>Hémagglutinines virales (isolement et purification)</term>
<term>Mutation faux-sens (MeSH)</term>
<term>Mutation ponctuelle (MeSH)</term>
<term>Sous-type H1N1 du virus de la grippe A (génétique)</term>
<term>Sous-type H1N1 du virus de la grippe A (isolement et purification)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en">
<term>Hemagglutinins, Viral</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="isolation & purification" xml:lang="en">
<term>Hemagglutinins, Viral</term>
</keywords>
<keywords scheme="MESH" type="geographic" xml:lang="en">
<term>Spain</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>Influenza A Virus, H1N1 Subtype</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr">
<term>Hémagglutinines virales</term>
<term>Sous-type H1N1 du virus de la grippe A</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en">
<term>Influenza A Virus, H1N1 Subtype</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr">
<term>Hémagglutinines virales</term>
<term>Sous-type H1N1 du virus de la grippe A</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr">
<term>Grippe humaine</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en">
<term>Influenza, Human</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Humans</term>
<term>Mutation, Missense</term>
<term>Point Mutation</term>
<term>Sequence Analysis, DNA</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Analyse de séquence d'ADN</term>
<term>Espagne</term>
<term>Humains</term>
<term>Mutation faux-sens</term>
<term>Mutation ponctuelle</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr">
<term>Espagne</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">From 27 April to 16 December 2009, we analyzed the hemagglutinin gene sequence of 2009 pandemic influenza A (H1N1) virus in 189 respiratory specimens. We only found the D225G mutation in 3 severe cases. However, it was not found in samples from other cases with or without clinical criteria of severity. The biologic significance of this mutation remains still unclear.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="MEDLINE" Owner="NLM">
<PMID Version="1">20356695</PMID>
<DateCompleted>
<Year>2010</Year>
<Month>08</Month>
<Day>09</Day>
</DateCompleted>
<DateRevised>
<Year>2010</Year>
<Month>09</Month>
<Day>27</Day>
</DateRevised>
<Article PubModel="Print-Electronic">
<Journal>
<ISSN IssnType="Electronic">1879-0070</ISSN>
<JournalIssue CitedMedium="Internet">
<Volume>67</Volume>
<Issue>2</Issue>
<PubDate>
<Year>2010</Year>
<Month>Jun</Month>
</PubDate>
</JournalIssue>
<Title>Diagnostic microbiology and infectious disease</Title>
<ISOAbbreviation>Diagn. Microbiol. Infect. Dis.</ISOAbbreviation>
</Journal>
<ArticleTitle>D225G mutation in the hemagglutinin protein found in 3 severe cases of 2009 pandemic influenza A (H1N1) in Spain.</ArticleTitle>
<Pagination>
<MedlinePgn>207-8</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1016/j.diagmicrobio.2010.02.002</ELocationID>
<Abstract>
<AbstractText>From 27 April to 16 December 2009, we analyzed the hemagglutinin gene sequence of 2009 pandemic influenza A (H1N1) virus in 189 respiratory specimens. We only found the D225G mutation in 3 severe cases. However, it was not found in samples from other cases with or without clinical criteria of severity. The biologic significance of this mutation remains still unclear.</AbstractText>
<CopyrightInformation>Copyright 2010 Elsevier Inc. All rights reserved.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Antón</LastName>
<ForeName>Andrés</ForeName>
<Initials>A</Initials>
<AffiliationInfo>
<Affiliation>Microbiology Laboratory, Hospital Clínic, 08036 Barcelona, Spain. aanton76@gmail.com</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Marcos</LastName>
<ForeName>María Angeles</ForeName>
<Initials>MA</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Martínez</LastName>
<ForeName>Miguel Julián</ForeName>
<Initials>MJ</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Ramón</LastName>
<ForeName>Susana</ForeName>
<Initials>S</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Martínez</LastName>
<ForeName>Anna</ForeName>
<Initials>A</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Cardeñosa</LastName>
<ForeName>Neus</ForeName>
<Initials>N</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Godoy</LastName>
<ForeName>Pere</ForeName>
<Initials>P</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Torner</LastName>
<ForeName>Nuria</ForeName>
<Initials>N</Initials>
</Author>
<Author ValidYN="Y">
<LastName>De Molina</LastName>
<ForeName>Patricia</ForeName>
<Initials>P</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Isanta</LastName>
<ForeName>Ricard</ForeName>
<Initials>R</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Jiménez de Anta</LastName>
<ForeName>María Teresa</ForeName>
<Initials>MT</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Pumarola</LastName>
<ForeName>Tomàs</ForeName>
<Initials>T</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2010</Year>
<Month>03</Month>
<Day>31</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>United States</Country>
<MedlineTA>Diagn Microbiol Infect Dis</MedlineTA>
<NlmUniqueID>8305899</NlmUniqueID>
<ISSNLinking>0732-8893</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D006389">Hemagglutinins, Viral</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="C458881">hemagglutinin fusogenic peptide, influenza virus</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList>
<MeshHeading>
<DescriptorName UI="D006389" MajorTopicYN="N">Hemagglutinins, Viral</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D053118" MajorTopicYN="N">Influenza A Virus, H1N1 Subtype</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D007251" MajorTopicYN="N">Influenza, Human</DescriptorName>
<QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D020125" MajorTopicYN="Y">Mutation, Missense</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D017354" MajorTopicYN="Y">Point Mutation</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D013030" MajorTopicYN="N" Type="Geographic">Spain</DescriptorName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="received">
<Year>2010</Year>
<Month>01</Month>
<Day>21</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted">
<Year>2010</Year>
<Month>02</Month>
<Day>02</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>2010</Year>
<Month>4</Month>
<Day>2</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed">
<Year>2010</Year>
<Month>4</Month>
<Day>2</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2010</Year>
<Month>8</Month>
<Day>10</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">20356695</ArticleId>
<ArticleId IdType="pii">S0732-8893(10)00038-6</ArticleId>
<ArticleId IdType="doi">10.1016/j.diagmicrobio.2010.02.002</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
<affiliations>
<list>
<country>
<li>Espagne</li>
</country>
<region>
<li>Catalogne</li>
</region>
</list>
<tree>
<noCountry>
<name sortKey="Carde Osa, Neus" sort="Carde Osa, Neus" uniqKey="Carde Osa N" first="Neus" last="Carde Osa">Neus Carde Osa</name>
<name sortKey="De Molina, Patricia" sort="De Molina, Patricia" uniqKey="De Molina P" first="Patricia" last="De Molina">Patricia De Molina</name>
<name sortKey="Godoy, Pere" sort="Godoy, Pere" uniqKey="Godoy P" first="Pere" last="Godoy">Pere Godoy</name>
<name sortKey="Isanta, Ricard" sort="Isanta, Ricard" uniqKey="Isanta R" first="Ricard" last="Isanta">Ricard Isanta</name>
<name sortKey="Jimenez De Anta, Maria Teresa" sort="Jimenez De Anta, Maria Teresa" uniqKey="Jimenez De Anta M" first="María Teresa" last="Jiménez De Anta">María Teresa Jiménez De Anta</name>
<name sortKey="Marcos, Maria Angeles" sort="Marcos, Maria Angeles" uniqKey="Marcos M" first="María Angeles" last="Marcos">María Angeles Marcos</name>
<name sortKey="Martinez, Anna" sort="Martinez, Anna" uniqKey="Martinez A" first="Anna" last="Martínez">Anna Martínez</name>
<name sortKey="Martinez, Miguel Julian" sort="Martinez, Miguel Julian" uniqKey="Martinez M" first="Miguel Julián" last="Martínez">Miguel Julián Martínez</name>
<name sortKey="Pumarola, Tomas" sort="Pumarola, Tomas" uniqKey="Pumarola T" first="Tomàs" last="Pumarola">Tomàs Pumarola</name>
<name sortKey="Ram N, Susana" sort="Ram N, Susana" uniqKey="Ram N S" first="Susana" last="Ram N">Susana Ram N</name>
<name sortKey="Torner, Nuria" sort="Torner, Nuria" uniqKey="Torner N" first="Nuria" last="Torner">Nuria Torner</name>
</noCountry>
<country name="Espagne">
<region name="Catalogne">
<name sortKey="Ant N, Andres" sort="Ant N, Andres" uniqKey="Ant N A" first="Andrés" last="Ant N">Andrés Ant N</name>
</region>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/GrippeEspagneV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000489 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000489 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    GrippeEspagneV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:20356695
   |texte=   D225G mutation in the hemagglutinin protein found in 3 severe cases of 2009 pandemic influenza A (H1N1) in Spain.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:20356695" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a GrippeEspagneV1 

Wicri

This area was generated with Dilib version V0.6.37.
Data generation: Fri Sep 25 11:01:38 2020. Site generation: Sat Feb 13 17:38:04 2021